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These marble cheesecake brownies taste the best of rich chocolate brownies and creamy cheesecake, in a neat bar. A little swirl brings the flavors together in every single bite. Don't forget the miniature chocolate chips on topโ€”and serve chilled!

Fingers picking up a marble brownie square from the rest on white paper
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Why this is the best marble cheesecake brownies recipe

To make out-of-this-world gluten free cheesecake brownies โ€” also known as zebra brownies โ€” you have to perfect two different recipes: the brownie batter and the cream cheese mixture. It took some time, but I totally did it.

And best of all, I did it using typical ingredients you'd find in the pantry. This means that when you suddenly find yourself in a brownie cheesecake kind of mood, you can head to the kitchen and indulge that craving whenever you want. Making cheesecake swirl brownies from scratch is easy thanks to my tried and true recipe.

Believe me when I say that the craving strikes this household quite often. These cream cheese brownies taste incredible! They're also so easy to store, thanks to their richness. I've never had these brownies go stale, whether I've popped them into the fridge or the freezer.

Overhead image of ingredients for brownie and cheesecake batters

How to make marble cheesecake brownies

These are not your average cheesecake brownies. I just want that settled straight away up front and center.

There isn't quite a cheesecake layer like you see in other recipes. I also don't pour chocolate batter into the pan, add the cheesecake mixture, and then pour the remaining brownie batter on top.

Instead, the cheesecake portion is mixed into the brownie portion, but loosely, so that it is still swirled a little bit, but the brownie part is kind of, well, cheesecake flavored.

And then the brownies are not overwhelming and are even smoother than you've ever known brownies to be.

Sprinkle a few mini chips on top, and bake at 350ยฐF just until the batter is baked but not overbaked. Like the perfect gluten free cheesecake, these bars will jiggle a bit when they're done baking, but in a controlled way, not loosely.

Brownie batter in mixing bowl on top, cheesecake batter in mixing bowl on bottom

Tips for making the best marble cheesecake brownies

Use room temperature ingredients for easier mixing

If you've ever tried to blend cold cream cheese, you know that it's quite a chore. For this reason, I insist that you use room temperature cream cheese and room temperature eggs for this gluten free cheesecake brownie recipe.

In addition to being easier to mix, ingredients warmed to room temperature will also ensure you don't end up with lumps in your cheesecake brownie batter. If your cream cheese is at the right temperature, but your eggs are cold, when you mix them, your cream cheese will be lumpy!

To achieve room temp cream cheese and eggs, just leave them out on the counter for an hour before starting. If you forget, you can chop your cream cheese into cubes and nuke them in the microwave in a couple of 15-second bursts but at reduced power (try 50%). For the eggs, carefully place them in a bowl of warm (not hot) water for about 15 minutes and they should be ready to go.

Mastering the brownie cheesecake swirl

Honestly, there's no special technique when it comes to swirling the cheesecake filling into the brownie batter. The only thing you want to avoid doing is vigorous mixing.

Using a mixing spoon, butter knife, toothpick, or even a chopstick, just drag your implement back and forth through the chocolate brownie batter to incorporate the two mixtures to your liking. I go for a such a gentle zigzag pattern that you'll find that the top still looks mostly like cheesecake.

Aim for undercooked, not overcooked, cheesecake brownies

If you find yourself unsure as to whether you should pull your gluten free zebra brownies from the oven or let them cook a few minutes longer, I suggest pulling them.

The nice thing about brownies is that they tend to be very forgiving if they've not quite cooked long enough. However, the opposite is true if you cook them too long. Overcooked cheesecake tends to be quite tough, so err on the side of caution when it comes to baking times.

Raw brownie layer in pan topped with cheesecake, swirled, then topped with chips

How to store cheesecake brownies

For being such a decadent dessert, marbled gluten free cheesecake brownies are very easy to store.

Whether you intend to eat them quickly or enjoy them over a week's time, you'll want to store these in the refrigerator since cheesecake is best served chilled. Just be sure to wrap them tightly so nothing dries out.

Can I freeze cheesecake brownies?

Absolutely, you can wrap the individual bars tightly and freeze. Take great care when wrapping them to ensure they don't absorb any freezer smells or tastes.

You can also freeze them in a single layer, separate from one another, on a rimmed baking sheet, then pile them into a zip top bag or other airtight container and back in the freezer.

When you're ready to have a brownie, you can enjoy one straight from the freezer or leave it on the countertop to defrost for about 30 minutes to an hour.

Marble brownies baked in foil lined pan

Marble heesecake brownies: substitution notes

Dairy free cheesecake brownies

There is quite a bit of dairy in this marble cheesecake brownies recipe on account of the butter, cream cheese, and chocolate topping. Switching out the butter and chocolate chips for vegan alternatives is easy enough, but unfortunately, that's not the case when it comes to the cream cheese.

I've tested various vegan cream cheese options, and while I find most of them palatable in small amounts, they just don't work for as much as you need in this recipe. There are always new ones on the market, though, and if you've found one you love the taste of, it might be worth trying here!

Egg free cheesecake brownies

While I've not tried it myself, you may be able to get away with chia eggs in place of the traditional eggs in this recipe.

However, if you were hoping for vegan cheesecake brownies, I hate to say it, but this isn't the recipe for you. Having to switch out the eggs and all the dairy would alter this recipe so much that it wouldn't come out anything like it's supposed to.

Can I make cheesecake brownies with low fat cream cheese?

I've tried using low fat cream cheeses in other recipes, and while the overall texture stayed much the same, I was not a fan of the taste. For this gluten free brownie cheesecake recipe, I'd suggest that you stick with the full fat.

However, be sure to pick up bricks and not the cream cheese that comes in tubs. Those whipped or spreadable varieties are too soft for these brownies.

Hand holding knife cutting marble brownies on white paper

FAQs

Can I use this recipe to make flourless cheesecake brownies?

As I've worked hard to perfect this cheesecake brownies recipe, I don't suggest that you make any changes you don't have to.

If you're out of flour or just in the mood for something richer, try my flourless brownies recipe instead.

Can I use this recipe to make brownies without the cheesecake swirl?

I developed this particular brownie recipe to go along with my cheesecake batter, so while it would probably be okay on its own, it wouldn't produce the best gluten free brownies.

Instead, I suggest you try my chewy gluten free brownies recipe. The ingredients are much the same, but the ratios are better suited for a fudgy chocolate brownie.

Can I make this recipe without cocoa powder for cheesecake blondies?

I'm afraid this recipe won't work without the cocoa powder, since the chemistry just won't work. But we do have a recipe for gluten free cheesecake blondies that I think you'll love!

Can I add nuts to this gluten free fudgy cheesecake brownies recipe?

Personally, I think the richness and texture of these cheesecake brownies are perfect. Of course, you're welcome to add chopped nuts if you'd like, but I would save them for another recipe.

Now if you're looking for something to add to make these brownies a little more special, may I suggest a few dollops of strawberry or raspberry jam? Incorporate the jam after the cream cheese mixture for a burst of fruity goodness.

Three marble brownie squares on white paper

Marble Cheesecake Brownies

5 from 15 votes
Prep Time: 20 minutes
Cook Time: 40 minutes
Chilling time: 1 hour 30 minutes
Yield: 9 brownies
Satisfy your cravings for brownies and cheesecake with these sweet and fudgy marble cheesecake brownies.
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Ingredients 

For the cheesecake mixture

  • 8 ounces cream cheese, at room temperature
  • โ…› teaspoon kosher salt
  • 1 teaspoon pure vanilla extract
  • ยฝ cup (100 g) granulated sugar
  • 1 (50 g (weighed out of shell)) egg, at room temperature

For the brownie base

  • โ… cup (88 g) all purpose gluten free flour blend, (I used Better Batter; click thru for appropriate blend info)
  • ยผ teaspoon xanthan gum, (omit if your blend already contains it)
  • โ…“ cup (27 g) Dutch-processed cocoa powder
  • ยฝ teaspoon baking powder
  • ยฝ teaspoon kosher salt
  • 1 cup (200 g) granulated sugar
  • 8 tablespoons (112 g) unsalted butter, melted and cooled
  • 2 (100 g (weighed out of shell)) eggs, at room temperature
  • 1 teaspoon pure vanilla extract
  • 2 ounces mini semi-sweet chocolate chips, (optional)

Instructions 

  • Preheat your oven to 350ยฐF.
  • Grease and line an 8-inch square baking pan with nonstick aluminum foil, regular aluminum foil greased with cooking oil spray, or parchment paper. Set the pan aside.

Make the cheesecake mixture.

  • In the bowl of a stand mixer fitted with the paddle attachment, or a large bowl with a handheld mixer, place the cream cheese, 1/8 teaspoon salt, 1 teaspoon vanilla, and 1/2 cup sugar, and beat until very smooth.
  • Add the egg, and beat again until smooth.
  • Transfer this mixture to a spouted 2 cup measuring cup, and set it aside.

Make the brownie base.

  • In a the same mixing bowl, place the flour, xanthan gum, cocoa powder, baking powder, 1/2 teaspoon kosher salt and 1 cup sugar, and whisk to combine well.
  • Add the melted butter, eggs, and vanilla, and beat until smooth.

Combine the batters.

  • Transfer the brownie mixture to the prepared pan and spread it into an even layer.
  • Pour the cheesecake mixture on top, and spread it into an even layer on top.
  • Using a chopstick, butter knife, or other small tool, swirl the batters together gently in a zigzag pattern. The top will look mostly like itโ€™s only cheesecake batter.
  • Scatter the optional mini chocolate chips on top in an even layer.

Bake the brownies.

  • Place the baking pan in the center of the preheated oven and bake, rotating once during baking, until the cheesecake layer jiggles but only in a controlled, not a loose, way and the top no longer glistens (about 40 minutes). Itโ€™s better to underbake than to overbake.
  • Remove from the oven and allow to cool in the pan until no longer hot to the touch, at least 30 minutes.
  • Place the pan in the refrigerator for 1 hour or until firm.
  • Remove the brownies from pan, peel away the foil or parchment paper, and slice with a sharp, clean and wet knife into 9 equal pieces.

Video

Notes

Originally published on the blog in 2012. In 2022, method changed, photos, video, and text all new.

Nutrition information is automatically calculated, so should only be used as an approximation.

Like this? Leave a comment below!

About Nicole Hunn

Hi, Iโ€™m Nicole. I create gluten free recipes that really work and taste as good as you remember. No more making separate meals when someone is GF, or buying packaged foods that arenโ€™t good enough to justify the price. At Gluten Free on a Shoestring, โ€œgood, for gluten freeโ€ just isnโ€™t good enough!

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35 Comments

  1. Mindy says:

    5 stars
    As usual, these brownies are absolutely amazing! They have a great texture, and are absolutely mouthwatering. Your recipes for baked goods are the only ones I will use. They are not only โ€œgood to say they are gluten-freeโ€, everyone in my family loves them. I love the way your recipes always recommend what type of flour to use, because nothing can ruin a recipe faster than using a different type of flour. Thank you for using so many pictures and always recommending the best way to store your baked goods.

    1. Nicole Hunn says:

      I’m so happy that you loved the recipe, Mindy, and I’m really grateful that you appreciate the specificity with flour blends! You are so right, that nothing can ruin a recipe faster than the wrong flour blend. I know that can feel like a burden, to have to choose carefully, but it’s main ingredient we are replacing, so it has to be right!

  2. May Congdon says:

    5 stars
    Delicious and so easy!

    1. Nicole Hunn says:

      So glad you loved them, May. You’re reminding me to make these again for my family. The only problem is that once I do, they’ll demand them repeatedly!

  3. Cristie says:

    5 stars
    These were the first gluten free treat I baked after my celiac diagnosis and I havenโ€™t stopped making them since. They are quick, easy and SO tasty.
    My (non gluten free) friends request these every time we have a get together๐Ÿ˜‚

    1. Nicole Hunn says:

      Aw, so glad you love them and so do your friends, Cristie!

  4. Shannon says:

    5 stars
    Made this yesterday for my Mom’s 75th – with a hard crowd to sell on “gluten free”. The biggest critic went back for seconds!! TOTAL crowd pleaser – thank you and I am putting the recipe in my rotation ;-).

    1. Nicole Hunn says:

      Aw, happy birthday to your mom! That’s awesome. Thanks for sharing that.

  5. Aimee Kreutzer-Malkawi says:

    5 stars
    These were fantastic!! We all couldnโ€™t get enough. Iโ€™ll be making round 2 of these this weekend again. Thanks for this recipe

    1. Nicole Hunn says:

      So glad you enjoyed them, Aimee. They’re that kind of bar, the kind that gets requested once everyone’s tried it!

  6. Susie says:

    5 stars
    So glad I found this recipe online! Iโ€™m making dessert for my bunko group tomorrow and we have two gluten free ladies. Iโ€™m making these! Iโ€™ve made another non gluten free recipe for these for years but this will be my first time gluten free. They look yummy! Iโ€™ll be subscribing to your website and bookmarking recipes!

    1. Nicole Hunn says:

      That’s very kind of you to do for them, Susie! Welcome to GFOAS. :)

  7. Kendra says:

    5 stars
    I have been baking for about 50 years! Love to bake! This is hands down one of the best recipes that I have EVER had! We have made these about 6 times in the last month! Lol

    1. Nicole Hunn says:

      That’s so awesome, Kendra! When my daughter has had friends over and they’ve tried these, they’ve been kind of skeptical at first, but then they tend to start asking casually whether I’ve made them again recently. So glad you’re having a similar experience!